CV

Amith J. Kamath

AI for Medical Imaging and Radiotherapy · ARTORG Center, University of Bern · Bern, Switzerland

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Profile

Research scientist in deep learning for medical imaging, with a PhD (summa cum laude) and almost nine years of software engineering and product work at MathWorks. I build segmentation and dose-prediction models judged by their clinical impact, published at MICCAI, MIDL, ISBI and IEEE EMBC and in Radiotherapy and Oncology, and I am turning them into a product, ContourAId, backed by two competitive translational fellowships.

My PhD established dose-aware quality assurance for radiotherapy contours; my current work extends it in three directions: segmentation models that stay reliable under distribution shift, contour review and correction that accounts for expert variability, and fast dose prediction across tumour sites.

Experience

2025 – present

Venture Fellow, then BRIDGE Proof of Concept Fellow

ARTORG Center, University of Bern · Bern, Switzerland

Lead ContourAId, a platform combining automated contouring, contour quality assurance and real-time dose prediction for faster, safer radiotherapy planning.

  • Funded by a University of Bern Venture Fellowship for feasibility and commercialization groundwork and, since 2026, an SNSF/Innosuisse BRIDGE Proof of Concept fellowship to develop it into a product.
  • Co-authored DoMa-Seg with PhD student Jihe Li: dose-aware segmentation training with 12% lower dosimetric error on target volumes and 1.8× faster training than a state-of-the-art dose-aware method.
  • Program chair of MIART 2026, the first MICCAI workshop on AI in radiation therapy.
2021 – 2025

Doctoral Researcher

Medical Image Analysis Lab, ARTORG Center, University of Bern · Bern, Switzerland

Advisor: Prof. Mauricio Reyes. In close collaboration with the Departments of Radiation Oncology at Inselspital Bern and the University Hospital Zurich. Co-developed PyRaDiSe, an open-source DICOM-RT auto-segmentation package.

  • Showed that a deep-learning dose predictor flags dosimetrically sub-optimal contours better than radiation oncologists (MIDL 2024), after quantifying how often experts misjudge contour impact (Radiotherapy and Oncology 2025).
  • Built ASTRA, dose-sensitivity maps that guide contour review (IEEE EMBC 2023), and co-developed a dual-layer QA system that caught 173 of 180 critical organ-at-risk contours while clearing 39% from manual review.
  • Showed that extra U-Net skip connections trade robustness for accuracy under texture shift across ultrasound, histology, MRI and CT (MICCAI 2023; Computers in Biology and Medicine 2025).
  • Supervised Master’s students and taught Medical Image Analysis.
2019 – 2021

Product Manager — AI in Academia (Asia Pacific)

MathWorks · Bangalore, India

Created AI teaching content adopted by 20+ universities and ran 40+ workshops and webinars; turned user feedback into requirements for MATLAB’s deep learning and computer vision toolboxes.

2012 – 2013

Software Engineering Intern

Vital Images (now Canon Medical) · Minnetonka, MN, USA

Built Qt/C++ annotation and measurement features for 3D volume visualization in Vitrea.

Education

2023 – 2027

MAS, Translational Medicine and Biomedical Entrepreneurship

University of Bern · Part-time

Expected 2027.

2021 – 2025

PhD, Biomedical Engineering, summa cum laude

University of Bern · Bern, Switzerland

Thesis: Fast and Reliable AI-based Dosimetric Contour Quality Assurance for Radiotherapy. Advisor: Prof. Mauricio Reyes.

2010 – 2012

MS, Electrical Engineering

University of Minnesota · Minneapolis, MN, USA

Thesis: A generalized CSA-ODF model for fiber orientation mapping. Advisor: Prof. Christophe Lenglet.

2006 – 2010

BTech, Electrical and Electronics Engineering

NIT Karnataka · Surathkal, India

Ranked 12th of 67 in the class.

Skills

Machine learning
Deep learning for segmentation, dose prediction and classification (PyTorch, MONAI); robustness to distribution shift; uncertainty estimation; generative data augmentation.
Medical imaging
CT, MRI, ultrasound; DICOM, DICOM-RT, NIfTI; radiotherapy treatment planning and contour QA.
Engineering
Python, C++, MATLAB; Git, Docker, CMake; shipping and maintaining production software.
Medical devices
Quality management (ISO 13485, IEC 62304), intellectual property and clinical trial design (MAS coursework).

Publications

Journal, conference and workshop papers, grouped by research theme, with citation counts on Google Scholar. Listed on Publications & talks.

Talks

Invited talks and presentations. Listed on Publications & talks.

Awards and grants

Awards, honours, grants and fellowships. Listed on Awards & grants.

Teaching

Courses, tutorials and teaching tools. Listed on Teaching & service.

Supervision

Master's theses supervised. Listed on Teaching & service.

Leadership and service

Events organized, peer review and outreach. Listed on Teaching & service.